{
"_id": "6ae13d1795ca2370cc8cae3b",
"Package": "spacescans",
"Type": "Package",
"Title": "Link Time-Referenced Geolocation Data to the Spatial and\nContextual Exposome",
"Version": "0.3.4",
"Authors@R": "c(\nperson(\"Xuguang\", \"Ai\", email = \"xuguang.ai@outlook.com\", role = c(\"aut\", \"cre\")),\nperson(\"Regenstrief Institute\", role = \"aut\"))",
"Description": "R client for the 'spacescans' 'Python' pipeline, which\nlinks time-referenced geolocation data (location episodes of\nstudy participants) to the spatial and contextual exposome and\nreturns one row per participant or per location episode. The\npipeline runs in a separate 'Python' process that the package\ntalks to through JSON request and result files and 'Parquet'\ntables, so a crash or an interrupt in 'Python' never takes the\nR session down. 'ss_install()' builds the 'Python' environment\nwith 'uv'.",
"License": "MIT + file LICENSE",
"URL": "https://github.com/IU-Ultraman/spacescans",
"BugReports": "https://github.com/IU-Ultraman/spacescans/issues",
"VignetteBuilder": "knitr",
"SystemRequirements": "Python 3.12 with the 'spacescans' Python package,\ninstalled by ss_install() with 'uv'\n(); macOS 14 or later on Apple\nsilicon is the supported platform.",
"Config/spacescans/version": "0.3.4",
"Config/spacescans/protocol": "1",
"Config/testthat/edition": "3",
"Encoding": "UTF-8",
"Roxygen": "list(markdown = TRUE)",
"Config/roxygen2/version": "8.1.1",
"Config/pak/sysreqs": "python3",
"Repository": "https://iu-ultraman.r-universe.dev",
"Date/Publication": "2026-10-27 20:30:38 UTC",
"RemoteUrl": "https://github.com/IU-Ultraman/spacescans",
"RemoteRef": "v0.3.4",
"RemoteSha": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"RemoteSubdir": "r",
"NeedsCompilation": "no",
"Packaged": {
"Date": "2026-10-28 00:02:12 UTC",
"User": "root"
},
"Author": "Xuguang Ai [aut, cre],\nRegenstrief Institute [aut]",
"Maintainer": "Xuguang Ai ",
"_user": "iu-ultraman",
"_type": "src",
"_file": "spacescans_0.3.4.tar.gz",
"_fileid": "https://r2.ropensci.org/e2a78e74d714e7876775f2b8a5f9bf84fbe2567d0ed4ccd35ee1e5cf3cce9bb3",
"_filesize": 377806,
"_sha256": "e2a78e74d714e7876775f2b8a5f9bf84fbe2567d0ed4ccd35ee1e5cf3cce9bb3",
"_expires": "2027-02-05T00:08:52.000Z",
"_created": "2026-10-28T00:02:12.000Z",
"_published": "2026-10-28T00:08:54.899Z",
"_upstream": "https://github.com/IU-Ultraman/spacescans",
"_status": "success",
"_maintainer": {
"name": "Xuguang Ai",
"email": "xuguang.ai@outlook.com",
"login": "xuguang-ai",
"description": "Data Scientist at Regenstrief Institute",
"uuid": 82428718
},
"_jobs": [
{
"job": 122546086718,
"time": 229,
"config": "linux-devel-x86_64",
"r": "4.7.0",
"check": "OK",
"artifact": "12780149900"
},
{
"job": 122546086708,
"time": 228,
"config": "linux-release-x86_64",
"r": "4.6.1",
"check": "OK",
"artifact": "12780728078"
},
{
"job": 122546086636,
"time": 359,
"config": "macos-oldrel-arm64",
"r": "4.5.3",
"check": "OK",
"artifact": "12780683373"
},
{
"job": 122546086628,
"time": 257,
"config": "macos-release-arm64",
"r": "4.6.1",
"check": "OK",
"artifact": "12780723226"
},
{
"job": 122544861142,
"time": 193,
"config": "source",
"r": "4.6.1",
"check": "OK",
"artifact": "12780672690"
},
{
"job": 122546086674,
"time": 96,
"config": "wasm-release",
"r": "4.6.0",
"check": "OK",
"artifact": "12781030244"
},
{
"job": 122546086621,
"time": 80,
"config": "windows-devel-x86_64",
"r": "4.7.0",
"check": "ERROR",
"artifact": "12780604144"
},
{
"job": 122546086645,
"time": 61,
"config": "windows-oldrel-x86_64",
"r": "4.5.3",
"check": "ERROR",
"artifact": "12780509140"
},
{
"job": 122546086662,
"time": 86,
"config": "windows-release-x86_64",
"r": "4.6.1",
"check": "ERROR",
"artifact": "12779579766"
}
],
"_buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382",
"_commit": {
"id": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"author": "xuguang-ai ",
"committer": "xuguang-ai ",
"message": "Release 0.3.4\n\nTests only: the R package's tests pass R CMD check on Linux with a merged\n/usr and skip the POSIX-only parts on Windows; Python 3.14 in the CI matrix.\nThe packages themselves are unchanged from 0.3.3.\n\nCo-Authored-By: Claude Fable 5.1 \n",
"time": 1793133038
},
"_distro": "resolute",
"_host": "GitHub-Actions",
"_registered": true,
"_dependencies": [
{
"package": "R",
"version": ">= 4.1.0",
"role": "Depends"
},
{
"package": "jsonlite",
"role": "Imports"
},
{
"package": "nanoparquet",
"role": "Imports"
},
{
"package": "processx",
"role": "Imports"
},
{
"package": "ps",
"role": "Imports"
},
{
"package": "stats",
"role": "Imports"
},
{
"package": "tools",
"role": "Imports"
},
{
"package": "utils",
"role": "Imports"
},
{
"package": "arrow",
"role": "Suggests"
},
{
"package": "bit64",
"role": "Suggests"
},
{
"package": "data.table",
"role": "Suggests"
},
{
"package": "knitr",
"role": "Suggests"
},
{
"package": "markdown",
"role": "Suggests"
},
{
"package": "testthat",
"version": ">= 3.0.0",
"role": "Suggests"
},
{
"package": "withr",
"role": "Suggests"
}
],
"_owner": "iu-ultraman",
"_selfowned": true,
"_usedby": 0,
"_updates": [
{
"week": "2026-23",
"n": 4
},
{
"week": "2026-24",
"n": 2
},
{
"week": "2026-31",
"n": 10
},
{
"week": "2026-38",
"n": 4
},
{
"week": "2026-41",
"n": 5
},
{
"week": "2026-42",
"n": 63
},
{
"week": "2026-43",
"n": 10
},
{
"week": "2026-44",
"n": 11
}
],
"_tags": [
{
"name": "v0.2.0",
"date": "2026-07-27"
},
{
"name": "v0.2.1",
"date": "2026-07-28"
},
{
"name": "v0.2.2",
"date": "2026-07-28"
},
{
"name": "v0.2.3",
"date": "2026-07-28"
},
{
"name": "v0.2.4",
"date": "2026-09-15"
},
{
"name": "v0.2.5",
"date": "2026-09-15"
},
{
"name": "v0.2.6",
"date": "2026-09-15"
},
{
"name": "v0.2.7",
"date": "2026-10-09"
},
{
"name": "v0.3.0",
"date": "2026-10-23"
},
{
"name": "v0.3.1",
"date": "2026-10-25"
},
{
"name": "v0.3.2",
"date": "2026-10-26"
},
{
"name": "v0.3.3",
"date": "2026-10-27"
},
{
"name": "v0.3.4",
"date": "2026-10-27"
}
],
"_stars": 2,
"_contributors": [
{
"user": "xuguang-ai",
"count": 269,
"uuid": 82428718
}
],
"_userbio": {
"uuid": 224837114,
"type": "organization",
"name": "IU-Ultraman",
"followers": 0
},
"_downloads": {
"count": 0,
"source": "https://cranlogs.r-pkg.org/downloads/total/last-month/spacescans"
},
"_devurl": "https://github.com/iu-ultraman/spacescans",
"_searchresults": 0,
"_rbuild": "4.6.1",
"_assets": [
"extra/citation.cff",
"extra/citation.html",
"extra/citation.json",
"extra/citation.txt",
"extra/contents.json",
"extra/manual.pdf",
"extra/NEWS.html",
"extra/NEWS.txt",
"extra/readme.html",
"extra/readme.md",
"extra/spacescans.html",
"LICENSE"
],
"_cranurl": false,
"_exports": [
"ss_cache_clear",
"ss_cache_info",
"ss_catalog",
"ss_config_schema",
"ss_coverage",
"ss_custom_polygon",
"ss_custom_raster",
"ss_data_dir",
"ss_data_import",
"ss_data_status",
"ss_data_terms",
"ss_data_verify",
"ss_dataset",
"ss_datasets",
"ss_doctor",
"ss_features",
"ss_fetch",
"ss_install",
"ss_job_attach",
"ss_job_cancel",
"ss_job_result",
"ss_job_status",
"ss_job_wait",
"ss_link",
"ss_python",
"ss_quickstart",
"ss_read_config",
"ss_read_result",
"ss_register_dataset",
"ss_remove_dataset",
"ss_run",
"ss_templates",
"ss_update_dataset",
"ss_use_python",
"ss_validate",
"ss_version",
"ss_write_config"
],
"_help": [
{
"page": "spacescans-conditions",
"title": "Conditions raised by spacescans",
"topics": [
"spacescans-conditions"
]
},
{
"page": "ss_cache_info",
"title": "The C3 weight cache",
"topics": [
"ss_cache_clear",
"ss_cache_info"
]
},
{
"page": "ss_catalog",
"title": "The exposure catalog",
"topics": [
"ss_catalog"
]
},
{
"page": "ss_config_schema",
"title": "The JSON schema of a pipeline config",
"topics": [
"ss_config_schema"
]
},
{
"page": "ss_coverage",
"title": "Estimate coverage before linking",
"topics": [
"ss_coverage"
]
},
{
"page": "ss_custom_polygon",
"title": "Bring your own exposure data",
"topics": [
"ss_custom_polygon",
"ss_custom_raster"
]
},
{
"page": "ss_data_dir",
"title": "The data directory",
"topics": [
"ss_data_dir"
]
},
{
"page": "ss_data_status",
"title": "What is in the data directory",
"topics": [
"ss_data_status"
]
},
{
"page": "ss_data_verify",
"title": "Verify, import and read terms of datasets",
"topics": [
"ss_data_import",
"ss_data_terms",
"ss_data_verify"
]
},
{
"page": "ss_datasets",
"title": "Registered datasets: your own data, prepared once and reused",
"topics": [
"ss_dataset",
"ss_datasets",
"ss_register_dataset",
"ss_remove_dataset",
"ss_update_dataset"
]
},
{
"page": "ss_doctor",
"title": "Check the spacescans setup",
"topics": [
"ss_doctor"
]
},
{
"page": "ss_features",
"title": "The feature dictionary",
"topics": [
"ss_features"
]
},
{
"page": "ss_fetch",
"title": "Download the data variables need",
"topics": [
"ss_fetch"
]
},
{
"page": "ss_install",
"title": "Install the Python side of spacescans",
"topics": [
"ss_install"
]
},
{
"page": "ss_job",
"title": "Background jobs",
"topics": [
"ss_job",
"ss_job_attach",
"ss_job_cancel",
"ss_job_result",
"ss_job_status",
"ss_job_wait"
]
},
{
"page": "ss_link",
"title": "Link a cohort to catalog variables",
"topics": [
"ss_link"
]
},
{
"page": "ss_quickstart",
"title": "Run the bundled quickstart demo",
"topics": [
"ss_quickstart"
]
},
{
"page": "ss_read_config",
"title": "Read and write pipeline configs as YAML",
"topics": [
"ss_read_config",
"ss_write_config"
]
},
{
"page": "ss_read_result",
"title": "Read a pipeline output table",
"topics": [
"ss_read_result"
]
},
{
"page": "ss_run",
"title": "Run one pipeline config",
"topics": [
"ss_run"
]
},
{
"page": "ss_templates",
"title": "Config templates shipped with the Python package",
"topics": [
"ss_templates"
]
},
{
"page": "ss_use_python",
"title": "Choose the Python interpreter spacescans uses",
"topics": [
"ss_python",
"ss_use_python"
]
},
{
"page": "ss_validate",
"title": "Validate a pipeline config without running it",
"topics": [
"ss_validate"
]
},
{
"page": "ss_version",
"title": "Versions of the R package, the Python package and the bridge protocol",
"topics": [
"ss_version"
]
}
],
"_readme": "https://github.com/IU-Ultraman/spacescans/raw/v0.3.4/r/README.md",
"_rundeps": [
"jsonlite",
"nanoparquet",
"processx",
"ps",
"R6"
],
"_vignettes": [
{
"source": "getting-started.Rmd",
"filename": "getting-started.html",
"title": "Getting started with spacescans",
"engine": "knitr::knitr",
"headings": [
"1. Install the Python side once",
"2. Choose a data directory and get the data",
"3. A minimal example",
"4. Output levels",
"5. Link your cohort",
"6. Long runs as background jobs",
"7. Your own data",
"8. When something goes wrong"
],
"created": "2026-10-13 00:36:27",
"modified": "2026-10-16 22:19:39",
"commits": 5
}
],
"_score": 3.9030899869919438,
"_indexed": true,
"_nocasepkg": "spacescans",
"_universes": [
"iu-ultraman",
"xuguang-ai"
],
"_previous": "0.3.3",
"_binaries": [
{
"r": "4.7.0",
"os": "linux",
"version": "0.3.4",
"date": "2026-10-28T00:04:09.000Z",
"distro": "resolute",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/92cb595fd49a68181a753ddfbda3d7ffa120a904049d458debb9a0c6469ab1dd",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.6.1",
"os": "linux",
"version": "0.3.4",
"date": "2026-10-28T00:04:10.000Z",
"distro": "resolute",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/8e0fa5074ce18d887ea5a0f246bc4a3ae1795ad5d7399c7540fcc1c4be14adfd",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.5.3",
"os": "mac",
"version": "0.3.4",
"date": "2026-10-28T00:06:07.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/30445e818b926f4c1b7cf8778861f4d865630153a1318fda88387f9d60862bdf",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.6.1",
"os": "mac",
"version": "0.3.4",
"date": "2026-10-28T00:04:02.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/9a63cf02e2d50c41ec18af3661942e0fb06d40dbae5db42c0ea4711b6860b5e8",
"status": "success",
"check": "OK",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.6.0",
"os": "wasm",
"version": "0.3.4",
"date": "2026-10-28T00:04:08.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/318d15f4e516f1ffed06c5c550336a7bce74cf5a65d36b3ed251f08c6736c43d",
"status": "success",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.7.0",
"os": "win",
"version": "0.3.4",
"date": "2026-10-28T00:03:21.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/0f6be2d612b72ef8d6136d4bfa12cdf941774b9f3884dad8ecebc6f314b9cc33",
"status": "failure",
"check": "ERROR",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.5.3",
"os": "win",
"version": "0.3.4",
"date": "2026-10-28T00:03:14.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/0cbdaa5d0547e3c38a596de9bf6366a4a4b916a3efbfec99a1247c75ccb71153",
"status": "failure",
"check": "ERROR",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
},
{
"r": "4.6.1",
"os": "win",
"version": "0.3.4",
"date": "2026-10-28T00:03:29.000Z",
"commit": "b49626c8c45863601fdb5e3a4c4a98af8fd07238",
"fileid": "https://r2.ropensci.org/2fef981f3a8fd370ef1787bc80290f00b6096381c22937258ec049cf05b1e5d8",
"status": "failure",
"check": "ERROR",
"buildurl": "https://github.com/r-universe/iu-ultraman/actions/runs/40605773382"
}
]
}